G2L: Bioinformatics

Custom data analysis (in scientific cooperations only):

• General quality management
  • Adapter clipping
  • Quality screening
• Genomics
  • Genome assemblies
  • Genome analysis including
    • gene prediction
    • functional annotation
  • Mutant analysis
    • SNP/ indel identification
    • functional impact analysis
  • all data sharing via integrated microbial genomes and metagenome server (IMG)
• RNA-Seq
  • Mapping/assembly
  • Automatic prediction:
  • Transcription start site (TSS)
  • 5’/3’ UTRs
  • ncRNAs
  • sense/anti-sense transcripts
  • Data visualization and interactive analysis in genome context with TraV

Scientific and technical contact person: